10.5281/zenodo.3235780
Morrison, Jean
Chromosome 19 LD data for simulating summary statistics
2019
Zenodo
1 k Genomes
R objects
causeSims R package
SNP correlation matrix
eigen decomposition
HapMap 3. Correlation matrices
LD Shrink
simulating summary statistics
chromosome 19
data frame
Chromosome 19 LD data
2019-05-31 04:47:30
article
https://zenodo.figshare.com/articles/Chromosome_19_LD_data_for_simulating_summary_statistics/8207999
<p>This data set contains two files both of which contain R objects.</p>
<p>chr19_snpdata_hm3only.RDS : A data frame with snp information</p>
<p>evd_list_chr19_hm3.RDS : A list of eigen decomposition of the SNP correlation matrix spanning chromosome 19</p>
<p>These data contain only SNPs in both 1k Genomes and HapMap3. Correlation matrices were estimated using LD Shrink. These data were built for use with the causeSims R package found here: https://github.com/jean997/causeSims</p>